Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886269.1_cds_XP_016440388.1_35852
CDS Infomation

[gene=LOC107766159] [db_xref=GeneID:107766159] [protein=COBRA-like protein 10] [protein_id=XP_016440388.1] [location=join(107558..107638,108230..108314,109123..109293,110722..111276,111358..112769)] [gbkey=CDS]
Sequence

ATGAATTCAAGACTGGGCCTGATTTTGCAGCAACTTCTATTGGTAATTCTGGTTCTGCAC
ATTCTCCATGGGCATCTCAAGGGCCAAATGCCTCCATCCAAAGGGACCCTAAAAGATTCT
TTGCCTCAAGCCAGGGAAAGCTTTGGACTTAGCTGTCTTAGAAGAAATTACACAGAATCA
ATGAGACAGCAACCAGCATCTGAGCTTTACAGGGACGTAGCACCTCCTAAGAAACAGAAG
CGGAGGAAGGCCAAGTCAACATCCTCTCCCAGGTCAGGTTCATCATCCTCATCAAGGTCA
TCACGAGCAGAAAAGTCCAAGGCTAAATTCGTCGAAGTTGGAAAAAGAATGAAGATGGTC
TCAAAAACCACAATCGTTTACATAATCTTGTTTTCTGTCACTATTAAGGCACAAGATTAT
GATGGTAATTCACCACCTGCACCTCCCCCTGCAGAAAATGACTGCAATGGCATTTTCTTA
TCCTATGTATTCATCTCTAGAACCAAAGAGCTTCCCCATTTAAAGAATGCAAGTGCACAG
GCCTGGGCCTTTAAGGCTATGGCAACAGTACTTAATGCTGGTATATATGAGCTCAAGAAC
TGGAAAGTCTTCATCGGGTTTCAAAATCGCGAACTCTTAGTCTCAGCTAGTAATGCTGTG
TTAGTAAATGGTGATGATTTCCCAGCTCCTGTTGGTAATGGAACTTACCTAGCTGGCTAT
CCTCAGACAGATTTGAAAACGTCGATTGATACTGCTGGTGATTATACACAAATTCAAGCC
GAGATTGAGTTAACAGGTACTCAGTTTGGAATCAGGCCACCGGGCTATCCCATGCCTAAA
ACTATTAAGCTTGTCAATGATGGATACAAATGTCCAGCACCTATTCGAAAATCAACAACA
ATGCACGTTTGCTGTGTAAAAGATCCAAAATTTAAGGCGAAGAATTTCACAACCAAGTAT
TTCCCACGCCAAAATGGTGATCTTTTGATCTCTTATGATGTTATGCAAGCCTATCCGAAT
AACTATCAAGCACAAGTGACCATACAAAATAATAATCCTTTGGGACGCCTTGATCAGTGG
AATTTAACTTGGGAATGGATGAGAGGAGAATTCATCTACTCAATGAGGGGTGCATATACT
CGCAAAAAGGACTACTCGGATTGTGTCTATGGTGCTGCAGGACAGTACTATCAAGACTTT
GATTTTTCTAAAGTACTGAACTGTGAAAAGAAGCCAACTATAGCTGATTTGCCTCCGGAT
AGAGCTCAAGATAAAGATGTTGGGATGTTACCATTCTGCTGCAGAAATGGTAGCATCATG
CCAAGTGTAATGAATGAAACCAATTCAAAGTCTGTTTTTCAGTTACAGGTATATAAGCTT
CCACCAGATTTGAATCTAACAGCTCTTTACCCTCCTGAGAAATGGAAAATCATCGGTGTT
CTTAATCCGGATTATAAATGTGGACAAGCCTTAAGAGTAGACGAGACACAATTCTCGGAT
CCAAGTGGACTTCAAGCTACTGTCACAGCTATTGCAAGTTGGCAAGTAGTCTGCAATATC
ACCAAGCCAAAGGAAAGAGCGAACAGGTGCTGTGTTTCTTACACTGCCTATTACAATGAT
TCTGTAATTCCCTGCGGCACTTGTGCATGTGGCTGTGATAGTTCTGTTAAATGCAATCAA
AAAGCACCAGCACTTTTTCTTCCCCCAGAAACACTATTGGTTCCATTCGCGAATAGAACA
GAGAAATCCGTATATTGGGCTAAACTAAAGCACTATCAGGTCCCTAGGCCGTTACCTTGT
GGTGACAACTGCGGGGTTAGCATAAATTGGCATGTTGATTCAAACTATAAAACAGGATGG
ACTGCTCGGATTACTATATTCAATTGGGAAGAAATCAATTTCGTGGACTGGTTCGTCGGG
ATCCAGTTCAAGAAAACTGGTTCTGGCTTTGCGCAAGCTTACTCTTTCAATGGAACTTTA
CTTCGAAATATGAATGACACAGTTTTCTTGACAGGACTACCTGGTTTAAATTACTTGATA
GCAGAAACAGATGGACAGAAACCTGGAGACCCTAGAGTACCCGGAAAGCAACAATCCGTC
CTTAAATTTGATAAGAAACATTTAGGAGGTATTGATATAGTAAATGGGGATGGATTTCCA
ACTATGTTGCTATTCAATGGAGAAGAATGTGCACTTCCCACTCATCTCTTGTCAGCAAAT
GGAAGAAAACGGCGTGCAAATTCTTGGCTAATCGCCATCATAACATTGTTAACCTTCTTG
CTGATGCTAAAAGACCTGCAATGA

Peptide Sequence

PEP ID

XP_016440388.1
PEP Infomation

PREDICTED: COBRA-like protein 10 [Nicotiana tabacum]
Sequence

MNSRLGLILQQLLLVILVLHILHGHLKGQMPPSKGTLKDSLPQARESFGLSCLRRNYTES
MRQQPASELYRDVAPPKKQKRRKAKSTSSPRSGSSSSSRSSRAEKSKAKFVEVGKRMKMV
SKTTIVYIILFSVTIKAQDYDGNSPPAPPPAENDCNGIFLSYVFISRTKELPHLKNASAQ
AWAFKAMATVLNAGIYELKNWKVFIGFQNRELLVSASNAVLVNGDDFPAPVGNGTYLAGY
PQTDLKTSIDTAGDYTQIQAEIELTGTQFGIRPPGYPMPKTIKLVNDGYKCPAPIRKSTT
MHVCCVKDPKFKAKNFTTKYFPRQNGDLLISYDVMQAYPNNYQAQVTIQNNNPLGRLDQW
NLTWEWMRGEFIYSMRGAYTRKKDYSDCVYGAAGQYYQDFDFSKVLNCEKKPTIADLPPD
RAQDKDVGMLPFCCRNGSIMPSVMNETNSKSVFQLQVYKLPPDLNLTALYPPEKWKIIGV
LNPDYKCGQALRVDETQFSDPSGLQATVTAIASWQVVCNITKPKERANRCCVSYTAYYND
SVIPCGTCACGCDSSVKCNQKAPALFLPPETLLVPFANRTEKSVYWAKLKHYQVPRPLPC
GDNCGVSINWHVDSNYKTGWTARITIFNWEEINFVDWFVGIQFKKTGSGFAQAYSFNGTL
LRNMNDTVFLTGLPGLNYLIAETDGQKPGDPRVPGKQQSVLKFDKKHLGGIDIVNGDGFP
TMLLFNGEECALPTHLLSANGRKRRANSWLIAIITLLTFLLMLKDLQ

Transcript Sequence

Gene sequence data has not been registered.